Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840600.1_cds_XP_016507666.1_20766
CDS Infomation

[gene=LOC107825330] [db_xref=GeneID:107825330] [protein=factor of DNA methylation 4-like] [protein_id=XP_016507666.1] [location=complement(join(26494..26724,26812..27015,28238..28525,28616..28684,29061..29242,29425..30028,30087..30593))] [gbkey=CDS]
Sequence

ATGTCTCGTAGAAGATCGGAGAAAAGTGAGAGTGCTAATTCAGAGTTGGAAGAGTTGAAG
TATAAATACTATAAAGATTTAAGAGATGAAATAGTCAAAATTAGACGTTCTGGAAAATAT
TTCAGATGTCCATACTGTGATAATTCTAGTAAAGAATATGATTTGCAAGATCTTCTAAGG
CATTCTTCCCGCATTGGTAGAGATTCAAAGAGTGCTAGTTTTAGAGACATAGCTAGACAT
TTGGGATTGCTCAAGTACTTGGATAGGTACGTCGATGCAGACAAGAAGGTATCCCAATCA
AGTCGAAGGAAAAGTTTTGAGCCATCAGGGAAGAGTTCTCGAGATGCTAAGAGTGATCCA
GTAGAGCCATCTCACATCACTGAGCAGTACAAAAGCGGAGGAAAATTTTATTCGTCTTCT
GTTAGGACAAGTGAAGCAGTAGATAAACCTGTTGATTGTGCTGAAGAGCGCCCGAGAAGG
GAAAAACTAAATGCAGAGAACACAGTGCATCTAATGAGCCATTTATCAATGAGGCCAAGG
ACGATCCTNGATCCCATAGTTTTTCCCTGGATGGGAGTAGTAGCCAATATCCCGGTTGAA
AATAAGGGAGGTAGGTATGTAGGTAAAAGTGGAACAAATCTAAAAAAGGAGTGGATTGCC
AAAGGGTTTAATCCAGTGAAGGTTCATCCTTTATGGAATTTCCGGGGTCACACTGGCTAT
GCCATAGTTGAATTTAAAGGGGATTGGTCGGGATTCATGAATGCTATGGCATTTGGTAAA
GCATTTGAATTGGATAAACATGGGAAGAGAGATTGGAATTTAGTAAGACATCGGGATGAT
AAATTATATGCTTGGATTGCGCGTGATGAAGATTACTACTCTGAGGCTCTCATTGGTAAA
CATCTCCGCAAACATGGAGATCTAAAGACAGTTTCTGAAATACAAGCAGAGAATAAAAGG
AAAGATTCTAGTCTACTATGCAACTTGACCAATGAGTTAGAGATGAAGAACAAGGCATGT
GAAGAGATGAAGAGAAAAATAAGCAGAACTGAAGTTTTTATGGATAATGTGATGAGTCAA
AAGGAGGAGATGGTTCAAAACTACAATGAAGAGATGGAGGTGATGCGGCGTAAAGCATTC
AATCAGCTCCGGGATTCCATACGTGAGCATGAGAAAAGTCGAATGCAGCTCAAAGCTCAA
AAAAAAGAATTGATGCTACGAGAACAAGAATTGAGAGAACGTGAAGCACTAAATGAGAGT
GAGCAAAGAAAGCTTGACCATCAAAAGGAGATGAATGAGAGGGCGATTTTGGAGCAGAAG
AAGGCTGATGAGAAAATTTTGAAATTGGCTGAAGATCAGAAGAAAGAAAAGGAACAACTT
CATAAAAGAATAATTGAACTTCAAGCAAAACTTGATCAGAAGCAAGCACTGGAGTTGCAG
ATTGAGCGCTTGCGAGGTGCCACGGAAGTGATGAGACACATGAATGTGGAAGGAGATCTC
GAAGCAAAGAAGAAACTGGAGTCAATTCAAGAAGAAATCAAGGAGAGTGAAGAAGAACTT
GAAAGCTTGGAAACACTGAATCAAACTCTAATTATAAAGGAAAGACTTACAAATGACGAG
GTGCAAGAAGCCCGTAAAGAGCTTATCAATGGTTTAAAGGAGAGCTGTGCTTTTATCTGT
GTCAAGAGAATGGGGGAACTTAATGAGAAACCATTCCATGCTGCTGCAAGAAAAATTTAC
AACTCGGAAGAAGCAGCAGAGAAAGCAATGGAACTATGTTCCTTGTGGGAGGATCACCTG
AGGGATCCAAATTGGCATCCGTATAAGGTTATCCAAAAGGGTCAAAATGTTGAGGAAGTA
ATTGATGAAGATGATGAGAAGTTGAAGGATCTAAAGACTGAGTATGGTGAAGAAGTGTAT
CAAGCTGTGGTAACTGCCTTAAATGAGTTGAATGAGCATAACCCCAGTGGTAGGTACCCA
GTACCTCAGTTGTGGAATAATAAGGAAAAAAGAACTGCATCATTGACAGAAGGAGCTGAG
TACATATTGAAACAGTGGAAGCTGTATAAGAGGAAAACAAGATGA

Peptide Sequence

PEP ID

XP_016507666.1
PEP Infomation

PREDICTED: factor of DNA methylation 4-like [Nicotiana tabacum]
Sequence

MSRRRSEKSESANSELEELKYKYYKDLRDEIVKIRRSGKYFRCPYCDNSSKEYDLQDLLR
HSSRIGRDSKSASFRDIARHLGLLKYLDRYVDADKKVSQSSRRKSFEPSGKSSRDAKSDP
VEPSHITEQYKSGGKFYSSSVRTSEAVDKPVDCAEERPRREKLNAENTVHLMSHLSMRPR
TILDPIVFPWMGVVANIPVENKGGRYVGKSGTNLKKEWIAKGFNPVKVHPLWNFRGHTGY
AIVEFKGDWSGFMNAMAFGKAFELDKHGKRDWNLVRHRDDKLYAWIARDEDYYSEALIGK
HLRKHGDLKTVSEIQAENKRKDSSLLCNLTNELEMKNKACEEMKRKISRTEVFMDNVMSQ
KEEMVQNYNEEMEVMRRKAFNQLRDSIREHEKSRMQLKAQKKELMLREQELREREALNES
EQRKLDHQKEMNERAILEQKKADEKILKLAEDQKKEKEQLHKRIIELQAKLDQKQALELQ
IERLRGATEVMRHMNVEGDLEAKKKLESIQEEIKESEEELESLETLNQTLIIKERLTNDE
VQEARKELINGLKESCAFICVKRMGELNEKPFHAAARKIYNSEEAAEKAMELCSLWEDHL
RDPNWHPYKVIQKGQNVEEVIDEDDEKLKDLKTEYGEEVYQAVVTALNELNEHNPSGRYP
VPQLWNNKEKRTASLTEGAEYILKQWKLYKRKTR

Transcript Sequence

Gene sequence data has not been registered.